About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21103REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21104-
Paelopatides21105IRE1-RELATED
Paelopatides21106-
Paelopatides21107PROTEIN CBG26694
Paelopatides21108-
Paelopatides21109GPI TRANSAMIDASE COMPONENT PIG-U
Paelopatides21110PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides21111GPI TRANSAMIDASE COMPONENT PIG-U
Paelopatides21112PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides21113ELONGATOR COMPLEX PROTEIN 6
Paelopatides21114PROTEIN CBG26694
Paelopatides21115TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides21116-
Paelopatides21117FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides21118MACROGLOBULIN / COMPLEMENT
Paelopatides21119MACROGLOBULIN / COMPLEMENT
Paelopatides21120ARYLSULFATASE FAMILY MEMBER
Paelopatides21121REVERSE TRANSCRIPTASES
Paelopatides21122BUCENTAUR RELATED
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