About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21146RETROTRANSPOSON
Paelopatides21147RETROTRANSPOSON GAG-LIKE PROTEIN 9
Paelopatides21148PROTEIN SSUH2 HOMOLOG
Paelopatides21149-
Paelopatides21150-
Paelopatides21151-
Paelopatides21152-
Paelopatides21153REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21154-
Paelopatides21155REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21156REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21157ZINC FINGER PROTEIN
Paelopatides21158TRANSPOSON
Paelopatides21159REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21160-
Paelopatides21161-
Paelopatides21162ARYLSULFATASE FAMILY MEMBER
Paelopatides21163-
Paelopatides21164REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21165NOTCH LIGAND FAMILY MEMBER
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