About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides2118752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides21188-
Paelopatides21189GTP-BINDING
Paelopatides21190GTP-BINDING
Paelopatides21191-
Paelopatides21192-
Paelopatides21193-
Paelopatides21194-
Paelopatides21195PEPTIDASE
Paelopatides21196ATP-CITRATE SYNTHASE
Paelopatides21197PROTEIN CBG23806
Paelopatides21198BUCENTAUR RELATED
Paelopatides21199ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21200AQUAPORIN OR AQUAGLYCEROPORIN RELATED
Paelopatides21201AMMONIUM TRANSPORTER
Paelopatides21202PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides21203ATP-DEPENDENT DNA HELICASE
Paelopatides21204ATP-DEPENDENT DNA HELICASE
Paelopatides21205-
Paelopatides21206-
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