About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22842-
Paelopatides22843WNT RELATED
Paelopatides22844EPM2A-INTERACTING PROTEIN 1
Paelopatides22845-
Paelopatides22846ENDONUCLEASE-RELATED
Paelopatides22847ENZYMATIC POLYPROTEIN-RELATED
Paelopatides22848TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides22849SI:CH211-262H13.3-RELATED-RELATED
Paelopatides22850-
Paelopatides22851DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides22852-
Paelopatides22853UNCHARACTERIZED
Paelopatides22854EPM2A-INTERACTING PROTEIN 1
Paelopatides22855-
Paelopatides2285652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides22857SEPIAPTERIN REDUCTASE
Paelopatides22858SEPIAPTERIN REDUCTASE
Paelopatides22859THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Paelopatides22860-
Paelopatides22861ATP-DEPENDENT RNA HELICASE DBP3
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