About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22902-
Paelopatides22903-
Paelopatides22904TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides22905CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides22906LIM DOMAIN-CONTAINING PROTEIN JUB
Paelopatides22907-
Paelopatides22908-
Paelopatides2290952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides22910-
Paelopatides22911CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides22912-
Paelopatides22913PROTEIN CBG23806
Paelopatides22914ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides22915REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22916PROTEIN CBG26694
Paelopatides22917-
Paelopatides22918SI:CH211-108C17.2-RELATED-RELATED
Paelopatides2291952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides22920PROTEIN CBG23806
Paelopatides22921-
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