About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26842-
Paelopatides26843-
Paelopatides26844-
Paelopatides26846LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides26847LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides26848-
Paelopatides26849-
Paelopatides26852POL PROTEIN
Paelopatides26853-
Paelopatides26854G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides26855PROTEIN CBG26694
Paelopatides26858MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Paelopatides26859-
Paelopatides26860PROTEIN DISULFIDE ISOMERASE
Paelopatides26863-
Paelopatides26864CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26865STI2 PROTEIN-RELATED
Paelopatides26866CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26867-
Paelopatides26868-
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