About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26869PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26870PROTEIN DISULFIDE-ISOMERASE A6
Paelopatides26871PROTEIN DISULFIDE-ISOMERASE A6
Paelopatides26872-
Paelopatides26875TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides26876-
Paelopatides26877NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Paelopatides26878ZGC:195170
Paelopatides26879TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides26880REVERSE TRANSCRIPTASES
Paelopatides26881-
Paelopatides26882-
Paelopatides26883-
Paelopatides26884-
Paelopatides26885CARBOHYDRATE SULFOTRANSFERASE
Paelopatides26886-
Paelopatides2688752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides26888-
Paelopatides26889POL PROTEIN
Paelopatides26890SI:DKEY-97L20.6
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