About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32386-
Paelopatides32387-
Paelopatides32388REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32389PUTATIVE PHOSPHOTRANSFERASE
Paelopatides32390REST COREPRESSOR COREST PROTEIN-RELATED
Paelopatides32391ZGC:195170
Paelopatides32392EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Paelopatides32393EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Paelopatides32394-
Paelopatides32395VACUOLAR PROTEIN SORTING 54
Paelopatides32396TETRASPANIN
Paelopatides32397TUBULIN FOLDING COFACTOR C
Paelopatides32398-
Paelopatides32399ARYLSULFATASE FAMILY MEMBER
Paelopatides32400UNCHARACTERIZED
Paelopatides32401ARYLSULFATASE FAMILY MEMBER
Paelopatides32402-
Paelopatides32403SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO
Paelopatides32404ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32405ZGC:172121
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