About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32366-
Paelopatides32367DRAB11-RELATED
Paelopatides32368-
Paelopatides32369-
Paelopatides32370REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32371CENTROCORTIN FAMILY MEMBER
Paelopatides32372-
Paelopatides32373ANGIOMOTIN
Paelopatides32374ANGIOMOTIN
Paelopatides32375PEPTIDASE
Paelopatides32376ANGIOMOTIN
Paelopatides32377TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
Paelopatides32378FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32379-
Paelopatides32380-
Paelopatides32381TRNA-DIHYDROURIDINE SYNTHASE
Paelopatides32382U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3
Paelopatides32383DNA REPAIR PROTEIN XP-C / RAD4
Paelopatides32384ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides32385ALPHA- 1,3 -FUCOSYLTRANSFERASE
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