About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34653RETROTRANSPOSON
Paelopatides34654RETROTRANSPOSON
Paelopatides34655-
Paelopatides34656REVERSE TRANSCRIPTASES
Paelopatides34657FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides34658WSCD FAMILY MEMBER CG9164
Paelopatides34659-
Paelopatides34660SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2
Paelopatides34661TRANSPOSON
Paelopatides34662-
Paelopatides34663THIOREDOXIN-LIKE PROTEIN 1
Paelopatides34664PROTEIN CBG03580
Paelopatides34665FANCONI-ASSOCIATED NUCLEASE 1
Paelopatides34666-
Paelopatides34667POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides34668-
Paelopatides34669UNCHARACTERIZED
Paelopatides34670-
Paelopatides34671PURPLE ACID PHOSPHATASE
Paelopatides34672TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
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