About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34693L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides34694-
Paelopatides34695NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
Paelopatides34696-
Paelopatides34697-
Paelopatides34698-
Paelopatides34699-
Paelopatides34700-
Paelopatides34701TUDOR DOMAIN CONTAINING PROTEIN
Paelopatides34702COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides34703EPM2A-INTERACTING PROTEIN 1
Paelopatides34704NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Paelopatides34705SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Paelopatides34706PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
Paelopatides34707PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
Paelopatides34708FI04643P-RELATED
Paelopatides34709CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides34710IP13529P
Paelopatides34711PARANEOPLASTIC ANTIGEN
Paelopatides34712PROTEIN CBG26694
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