About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38194DNA HELICASE RECQ FAMILY MEMBER
Paelopatides38195-
Paelopatides38196SI:CH211-243P7.3-RELATED
Paelopatides38197-
Paelopatides38198-
Paelopatides38199-
Paelopatides38200-
Paelopatides38201BATTENIN
Paelopatides38202L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides38203-
Paelopatides38204REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38205COILED-COIL DOMAIN-CONTAINING PROTEIN 15
Paelopatides38206ETS
Paelopatides38207-
Paelopatides38208-
Paelopatides38209SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides38210TRANSMEMBRANE PROTEIN 136
Paelopatides38211POL PROTEIN
Paelopatides38212NETRIN RECEPTOR UNC5
Paelopatides38213ADENOSINE KINASE
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