About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38134FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides38135-
Paelopatides38136-
Paelopatides38137BCAS2 PROTEIN
Paelopatides38138LD33804P
Paelopatides38139JITTERBUG, ISOFORM N
Paelopatides38140JITTERBUG, ISOFORM N
Paelopatides38141RIBOSOME BIOGENESIS PROTEIN
Paelopatides38142-
Paelopatides38143REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38144RIBOSOME BIOGENESIS PROTEIN
Paelopatides38145-
Paelopatides38146-
Paelopatides38147ALDEHYDE DEHYDROGENASE-RELATED
Paelopatides38148N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1
Paelopatides38149-
Paelopatides38150-
Paelopatides38151PROTEIN CBG26694
Paelopatides38152NETRIN/LAMININ-RELATED
Paelopatides38153EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
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