About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38214FTP DOMAIN-CONTAINING PROTEIN
Paelopatides38215PROTEIN CBG26694
Paelopatides38216FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38217UNCHARACTERIZED
Paelopatides38218AGAP009604-PA
Paelopatides38219ZINC FINGER PROTEIN
Paelopatides38220GTP-BINDING
Paelopatides38221-
Paelopatides38222-
Paelopatides38223SI:CH211-196P9.1-RELATED
Paelopatides38224CYTOCHROME C OXIDASE POLYPEPTIDE VIA
Paelopatides38225RIBOSOMAL PROTEIN S6 KINASE
Paelopatides38226ENDONUCLEASE-RELATED
Paelopatides38227ASPARTYL PROTEASE DDI-RELATED
Paelopatides38228PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38229INOSITOL 5-PHOSPHATASE
Paelopatides38230METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides38231-
Paelopatides38232PRE-MRNA-PROCESSING FACTOR 19
Paelopatides38233-
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