About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38888-
Paelopatides38889ANKYRIN REPEAT-CONTAINING
Paelopatides38890PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides38891-
Paelopatides38892ENDONUCLEASE-RELATED
Paelopatides38893PROTEIN CBG26694
Paelopatides38894ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38895SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides38896-
Paelopatides38897HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Paelopatides38898-
Paelopatides38899FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides38900CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides38901-
Paelopatides38902-
Paelopatides38903REVERSE TRANSCRIPTASES
Paelopatides38904ACTIN
Paelopatides38905ACTIN
Paelopatides38906ACTIN
Paelopatides38907ACTIN
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