About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38929PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
Paelopatides38930-
Paelopatides38931FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38932TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides38933REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides38934FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38935PROTEIN CBG26694
Paelopatides38936-
Paelopatides38937ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides38938-
Paelopatides38939TRANSPOSON
Paelopatides38940CAMK FAMILY PROTEIN KINASE
Paelopatides38941PROSTAGLANDIN REDUCTASE
Paelopatides38942ELONGATION FACTOR TS
Paelopatides38943REGULATOR OF G PROTEIN SIGNALING
Paelopatides38944KREMEN PROTEIN
Paelopatides38945TYROSINE-PROTEIN KINASE
Paelopatides38946-
Paelopatides38947ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides38948ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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