About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42981-
Paelopatides42982-
Paelopatides42983OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides42984ODD-SKIPPED - RELATED
Paelopatides42985SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
Paelopatides42986NINEIN
Paelopatides42987KELCH DOMAIN-CONTAINING PROTEIN 3
Paelopatides42988-
Paelopatides42989-
Paelopatides42990REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42991-
Paelopatides42992GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides42994HEDGEHOG
Paelopatides42995GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides42996-
Paelopatides42997SI:CH211-196P9.1-RELATED
Paelopatides42998-
Paelopatides42999-
Paelopatides43000PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43001PHD-TYPE DOMAIN-CONTAINING PROTEIN
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