About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43718-
Paelopatides43719PESCADILLO - RELATED
Paelopatides43720SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2
Paelopatides43721ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides43722MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides43723HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED
Paelopatides43724CHAPERONIN
Paelopatides43725-
Paelopatides43726-
Paelopatides43727SET AND MYND DOMAIN-CONTAINING PROTEIN 4
Paelopatides43728PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides43729ENDONUCLEASE-RELATED
Paelopatides43730LD24721P
Paelopatides43731RAPSYN-RELATED
Paelopatides43732RAPSYN-RELATED
Paelopatides43733IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides43734PSEUDOURIDINE SYNTHASE-RELATED
Paelopatides43735ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides43736-
Paelopatides43737-
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