About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43778-
Paelopatides43779-
Paelopatides43780-
Paelopatides43781PROTEIN CBG26694
Paelopatides43782BUCENTAUR RELATED
Paelopatides43783-
Paelopatides43784-
Paelopatides43785ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides43786-
Paelopatides43787VESICULAR-FUSION PROTEIN NSF
Paelopatides43788PROTEIN CBG26694
Paelopatides4378960S RIBOSOMAL PROTEIN L13
Paelopatides43790-
Paelopatides43791LEUCYL-TRNA SYNTHETASE
Paelopatides43792ZINC FINGER PROTEIN
Paelopatides43793PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides43794-
Paelopatides43795PROPERDIN
Paelopatides43796-
Paelopatides43797PROTEIN CBG26694
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