About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45066-
Paelopatides45067SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides45068-
Paelopatides45069ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides45070ENZYMATIC POLYPROTEIN-RELATED
Paelopatides45071FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45072FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides45073-
Paelopatides45074MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
Paelopatides45075RIBONUCLEASE
Paelopatides45076RIBONUCLEASE
Paelopatides45077DNA2/NAM7 HELICASE FAMILY
Paelopatides45078YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides45079-
Paelopatides45080ACID PHOSPHATASE-RELATED
Paelopatides45081ACID PHOSPHATASE-RELATED
Paelopatides45082SCAVENGER RECEPTOR CLASS F
Paelopatides45083-
Paelopatides45084-
Paelopatides45085-
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