About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides45127REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45128-
Paelopatides45129ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides45130MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
Paelopatides45131-
Paelopatides45132-
Paelopatides45133TYROSINE-PROTEIN KINASE
Paelopatides45134TELOMERASE REVERSE TRANSCRIPTASE
Paelopatides45135TRANSPOSABLE ELEMENT-RELATED
Paelopatides45136TRANSPOSABLE ELEMENT-RELATED
Paelopatides45137-
Paelopatides45138RHO FAMILY GTPASE
Paelopatides45139REVERSE TRANSCRIPTASE
Paelopatides45140LD41958P
Paelopatides45141REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides45142-
Paelopatides45143INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE
Paelopatides45144TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides45145ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides451462,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE
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