About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g10943
Clavulariidae_g10944SI:DKEY-29D5.2
Clavulariidae_g10945
Clavulariidae_g10946CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g10947
Clavulariidae_g10948RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10949
Clavulariidae_g1095
Clavulariidae_g10950DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10951
Clavulariidae_g10952
Clavulariidae_g10953-
Clavulariidae_g10954
Clavulariidae_g10955
Clavulariidae_g10956
Clavulariidae_g10957-
Clavulariidae_g10958INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Clavulariidae_g10959SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g1096
Clavulariidae_g10960SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g10961
Clavulariidae_g10962
Clavulariidae_g10963
Clavulariidae_g10964
Clavulariidae_g10965
Clavulariidae_g10966ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10967
Clavulariidae_g10968
Clavulariidae_g10969PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1097RETROTRANSPOSON
Clavulariidae_g10970RETROTRANSPOSON
Clavulariidae_g10971EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10972THAP DOMAIN PROTEIN
Clavulariidae_g10973
Clavulariidae_g10974
Clavulariidae_g10975UNCHARACTERIZED
Clavulariidae_g10976MADF DOMAIN TRANSCRIPTION FACTOR
Clavulariidae_g10977
Clavulariidae_g10978
Clavulariidae_g10979ATP-DEPENDENT DNA HELICASE
Clavulariidae_g1098
Clavulariidae_g10980
Clavulariidae_g10981IODOTHYRONINE DEIODINASE
Clavulariidae_g10982DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g10983SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g10984
Clavulariidae_g10985PROTEIN CBG23764
Clavulariidae_g10986
Clavulariidae_g10987
Clavulariidae_g10988SI:CH211-108C17.2-RELATED-RELATED
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