About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_12623-0.3TOLL-LIKE RECEPTOR
Bpl_scaf_12623-0.5DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12629-0.0SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_12629-0.10ACROSIN-RELATED
Bpl_scaf_12629-0.6OVOCHYMASE-RELATED
Bpl_scaf_12688-0.8
Bpl_scaf_12688-0.9
Bpl_scaf_1270-0.0
Bpl_scaf_1270-0.1
Bpl_scaf_1270-0.5
Bpl_scaf_1270-1.10UNCHARACTERIZED
Bpl_scaf_1270-1.9AGAP001331-PA-RELATED
Bpl_scaf_1271-0.15LD33804P
Bpl_scaf_1271-0.5NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Bpl_scaf_1271-0.7
Bpl_scaf_1271-1.0
Bpl_scaf_1271-2.12RAN GTPASE-ACTIVATING PROTEIN 1
Bpl_scaf_1271-2.15PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Bpl_scaf_1271-2.9HISTONE ACETYLTRANSFERASE COMPLEX
Bpl_scaf_1271-3.0METALLOPROTEASE TIKI
Bpl_scaf_1271-3.1METALLOPROTEASE TIKI
Bpl_scaf_1271-3.5FATTY ACID ACYL TRANSFERASE-RELATED
Bpl_scaf_1271-4.7FAS-ASSOCIATED PROTEIN
Bpl_scaf_1271-4.8SLIT HOMOLOG
Bpl_scaf_1271-4.9ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_1271-5.7PROTEASOME SUBUNIT ALPHA/BETA
Bpl_scaf_1271-6.6HEMK METHYLTRANSFERASE
Bpl_scaf_1271-6.7RIBONUCLEASE P SUBUNIT P30
Bpl_scaf_1271-6.8
Bpl_scaf_1271-8.7DUAL SPECIFICITY PROTEIN KINASE
Bpl_scaf_1271-9.4SERINE/ARGININE RICH SPLICING FACTOR
Bpl_scaf_12716-0.6
Bpl_scaf_12716-0.7
Bpl_scaf_12722-0.0
Bpl_scaf_12731-0.3
Bpl_scaf_12736-0.11
Bpl_scaf_12736-0.3
Bpl_scaf_12736-0.9
Bpl_scaf_12745-0.0
Bpl_scaf_12745-0.6
Bpl_scaf_12751-0.0
Bpl_scaf_12751-0.10PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_12751-0.11DELTEX-RELATED
Bpl_scaf_12751-0.12
Bpl_scaf_12760-0.1BONUS, ISOFORM C-RELATED
Bpl_scaf_12771-0.6
Bpl_scaf_12771-0.8LITHOSTATHINE
Bpl_scaf_12781-0.0
Bpl_scaf_12781-0.1
Bpl_scaf_12781-0.10
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