About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06199PROTEIN CBG26694
Paelopatides06200INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides06201TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides06202FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06203L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides06204-
Paelopatides06205EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
Paelopatides06206SERINE-THREONINE PROTEIN KINASE
Paelopatides06207ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Paelopatides06208-
Paelopatides06210L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides06211REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06212REVERSE TRANSCRIPTASES
Paelopatides06213BUCENTAUR RELATED
Paelopatides06214-
Paelopatides06215CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides06216CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides06217-
Paelopatides06218RETROTRANSPOSON
Paelopatides06219RETROTRANSPOSON
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