About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06241CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides06242-
Paelopatides06243REVERSE TRANSCRIPTASE
Paelopatides06244REVERSE TRANSCRIPTASE
Paelopatides06245-
Paelopatides06246ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides06247BUCENTAUR RELATED
Paelopatides06248-
Paelopatides06249-
Paelopatides06250SLR5058 PROTEIN
Paelopatides06251-
Paelopatides06252POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides06253-
Paelopatides06254STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides06255ZGC:195170
Paelopatides06256SI:CH211-108C17.2-RELATED-RELATED
Paelopatides06257-
Paelopatides06258ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides06259ENDONUCLEASE
Paelopatides06260BONUS, ISOFORM C-RELATED
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