About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06302-
Paelopatides06303PROTEIN CBG26694
Paelopatides06304-
Paelopatides06305-
Paelopatides06306-
Paelopatides06307HIV-1 REV BINDING PROTEIN 2, 3
Paelopatides06308SLR5058 PROTEIN
Paelopatides06309NETRIN RECEPTOR UNC5
Paelopatides06310-
Paelopatides06311B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides06312ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides06313CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26
Paelopatides06314-
Paelopatides06315TRANSPOSABLE ELEMENT-RELATED
Paelopatides06316TRANSPOSABLE ELEMENT-RELATED
Paelopatides06317PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides06318HVA22-LIKE PROTEINS
Paelopatides06319-
Paelopatides06320-
Paelopatides06321-
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