About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06383-
Paelopatides06384LON PROTEASE
Paelopatides06385-
Paelopatides06386-
Paelopatides06387EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides06388-
Paelopatides06389PARANEOPLASTIC ANTIGEN
Paelopatides06390PROTEIN CBG26694
Paelopatides06391ENDONUCLEASE-RELATED
Paelopatides06392PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides06393PROTEIN, PUTATIVE-RELATED
Paelopatides06394REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06395SI:CH211-108C17.2-RELATED-RELATED
Paelopatides06396-
Paelopatides06397GTP-BINDING
Paelopatides06398PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides06399POL PROTEIN
Paelopatides06400ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06401-
Paelopatides06402ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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