About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06463POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides06464FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06465-
Paelopatides06466RIBOSOME RECYCLING FACTOR
Paelopatides06467RAS-LIKE FAMILY MEMBER 11
Paelopatides06468-
Paelopatides06469-
Paelopatides06470-
Paelopatides06471-
Paelopatides06472REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06473NETRIN RECEPTOR UNC5
Paelopatides06474ENDONUCLEASE-RELATED
Paelopatides06475POL PROTEIN
Paelopatides06476ENDONUCLEASE-RELATED
Paelopatides06477L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides06478BUCENTAUR RELATED
Paelopatides06479G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides06480ENDONUCLEASE
Paelopatides06481ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06482GAG-RELATED PROTEIN
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