About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06483UNCHARACTERIZED
Paelopatides06484SI:CH211-108C17.2-RELATED-RELATED
Paelopatides06485ZGC:195170
Paelopatides06486REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06487CYTOCHROME P450 FAMILY 4
Paelopatides06488SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides06489-
Paelopatides06490TYROSINE-PROTEIN KINASE
Paelopatides06491-
Paelopatides06492UNCHARACTERIZED
Paelopatides06493CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides06494NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides06495CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides06496GTP-BINDING
Paelopatides06497REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06498ALDEHYDE DEHYDROGENASE-RELATED
Paelopatides06499-
Paelopatides06500REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06501FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06502PROTEIN CBG26694
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