About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06503ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06504POL PROTEIN
Paelopatides06505ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides06506RING FINGER PROTEIN 31-RELATED
Paelopatides06507ANAPHASE-PROMOTING COMPLEX SUBUNIT CDC26
Paelopatides06508-
Paelopatides06509ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06510-
Paelopatides06511FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06512MISSHAPEN LIKE KINASE 1
Paelopatides06513-
Paelopatides06514HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06515-
Paelopatides06516UNCHARACTERIZED
Paelopatides06517-
Paelopatides06518SH2 DOMAIN-CONTAINING PROTEIN
Paelopatides06519-
Paelopatides06520SH2 DOMAIN-CONTAINING PROTEIN
Paelopatides06521ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides06522POL PROTEIN
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