About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06609NECTIN-RELATED
Paelopatides06610-
Paelopatides06611TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides06612-
Paelopatides06613-
Paelopatides06614PROTEIN CBG26694
Paelopatides06615INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides06616GLUTATHIONE PEROXIDASE
Paelopatides06617NAD DEPENDENT EPIMERASE/DEHYDRATASE
Paelopatides06618NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT
Paelopatides06619-
Paelopatides06620-
Paelopatides06622REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06625-
Paelopatides06626TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides06627-
Paelopatides06628-
Paelopatides06629DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides06630OS05G0310600 PROTEIN
Paelopatides06631-
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