About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06543PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H
Paelopatides06544-
Paelopatides06545UNCHARACTERIZED
Paelopatides06547FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06548DPY-19-LIKE 1, LIKE (H. SAPIENS)
Paelopatides06549-
Paelopatides06550FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06551CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides06552PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides06553-
Paelopatides06554REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides06555-
Paelopatides06556-
Paelopatides06557DYNACTIN SUBUNIT 5
Paelopatides06558-
Paelopatides06559NETRIN RECEPTOR UNC5
Paelopatides06560-
Paelopatides06561-
Paelopatides06565SI:CH211-108C17.2-RELATED-RELATED
Paelopatides06566CYTOCHROME C OXIDASE PROTEIN 20
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