About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12638P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN
Paelopatides12639KINESIN-RELATED PROTEIN 6
Paelopatides12640PROTEIN CBG26694
Paelopatides12641-
Paelopatides12642MATERNAL EFFECT PROTEIN STAUFEN
Paelopatides12643MATERNAL EFFECT PROTEIN STAUFEN
Paelopatides12644MATERNAL EFFECT PROTEIN STAUFEN
Paelopatides12645-
Paelopatides12646ALCOHOL DEHYDROGENASE
Paelopatides12647-
Paelopatides12648SERINE/THREONINE-PROTEIN KINASE 17
Paelopatides12649DENTIN SIALOPHOSPHOPROTEIN
Paelopatides12650SERINE/THREONINE-PROTEIN KINASE 17
Paelopatides12651BUCENTAUR RELATED
Paelopatides12652DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides12653-
Paelopatides12654NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides12655-
Paelopatides12656-
Paelopatides12657-
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