About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17000UNCHARACTERIZED
Paelopatides17001MULTICOPPER OXIDASE-RELATED
Paelopatides17002CANCER/TESTIS ANTIGEN 55
Paelopatides17003-
Paelopatides17004BONUS, ISOFORM C-RELATED
Paelopatides17005UBIQUITIN THIOESTERASE
Paelopatides17006-
Paelopatides17007NETRIN RECEPTOR UNC5
Paelopatides17008-
Paelopatides17009-
Paelopatides17010REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17011-
Paelopatides17012-
Paelopatides17013ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17014POL PROTEIN
Paelopatides17015NEUROPEPTIDE Y RECEPTOR
Paelopatides17016LD39211P
Paelopatides17017UNCHARACTERIZED
Paelopatides17018UNCHARACTERIZED
Paelopatides17019-
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