About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17294-
Paelopatides17295REVERSE TRANSCRIPTASES
Paelopatides17296-
Paelopatides172974.1 G PROTEIN
Paelopatides17298PROTEIN CBG26694
Paelopatides17299PARANEOPLASTIC ANTIGEN
Paelopatides17300EPM2A-INTERACTING PROTEIN 1
Paelopatides17301ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Paelopatides17302ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Paelopatides17303ENDOGLIN/TGF-BETA RECEPTOR TYPE III
Paelopatides17304INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17305-
Paelopatides17306-
Paelopatides17307FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides17308-
Paelopatides17309-
Paelopatides17310PROTEIN CBG26694
Paelopatides17311-
Paelopatides17312PROTEIN CBG26694
Paelopatides17313ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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