About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17314G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides17315HIRA-INTERACTING PROTEIN 3
Paelopatides17316LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides17317GAG-RELATED PROTEIN
Paelopatides17318-
Paelopatides17319-
Paelopatides17320-
Paelopatides17321ENDONUCLEASE-RELATED
Paelopatides17322ASPARAGINE SYNTHETASE
Paelopatides17323ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17324-
Paelopatides17325-
Paelopatides17326-
Paelopatides17327PR DOMAIN ZINC FINGER PROTEIN
Paelopatides17328FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides17329-
Paelopatides17330-
Paelopatides17331DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides17332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17333RETROTRANSPOSON
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