About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17334CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17335CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17337-
Paelopatides17338-
Paelopatides17339TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides17340PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides17341RETROTRANSPOSON
Paelopatides17342RETROTRANSPOSON
Paelopatides17343TRIOKINASE/FMN CYCLASE
Paelopatides17344-
Paelopatides17345MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides17346PROTEIN CHURCHILL
Paelopatides17347TRANSLATION INITIATION FACTOR EIF3-RELATED
Paelopatides17348-
Paelopatides17349PROTEIN YIPPEE-LIKE CG15309-RELATED
Paelopatides17350-
Paelopatides17351-
Paelopatides17352ENDONUCLEASE-RELATED
Paelopatides17353-
Paelopatides17354-
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