About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17396HOMER
Paelopatides17398EXPRESSED PROTEIN
Paelopatides17400-
Paelopatides17401GTP-BINDING
Paelopatides17402GTP-BINDING
Paelopatides17403-
Paelopatides17404PROTEIN CBG26694
Paelopatides17405GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
Paelopatides17406SKP1
Paelopatides17407SKP1
Paelopatides17408BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE
Paelopatides17409-
Paelopatides17410-
Paelopatides17411RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides17412RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides17413TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides17414EPM2A-INTERACTING PROTEIN 1
Paelopatides17415-
Paelopatides17416REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17417FATTY ACID BINDING PROTEIN
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