About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17463REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17464-
Paelopatides17465NUCLEAR RECEPTOR COACTIVATOR 4
Paelopatides17466NUCLEAR RECEPTOR COACTIVATOR 4
Paelopatides17467-
Paelopatides17468ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17469ACYL-COA DESATURASE
Paelopatides17470EF HAND DOMAIN FAMILY A1,A2-RELATED
Paelopatides17471CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
Paelopatides17472-
Paelopatides17473EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Paelopatides17474YBAK DOMAIN-CONTAINING PROTEIN
Paelopatides17475ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides17476MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
Paelopatides17477BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides17478CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17479-
Paelopatides17480REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17481HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17482IP13529P
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