About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17505-
Paelopatides17506-
Paelopatides17507-
Paelopatides17508REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17509-
Paelopatides17510PROTEIN CBG26694
Paelopatides17511PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides17512-
Paelopatides17513PROTEIN CBG26694
Paelopatides17514PROTEIN CBG26694
Paelopatides17515REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17516FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides17518HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17519ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides17520-
Paelopatides17521PROLINE OXIDASE
Paelopatides17522PEROXISOMAL SARCOSINE OXIDASE
Paelopatides17523PEROXISOMAL SARCOSINE OXIDASE
Paelopatides17524UNCHARACTERIZED PROTEIN KIAA2013
Paelopatides17525PEROXISOMAL SARCOSINE OXIDASE
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