About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17483ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17484ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17485PROTEIN CBG26694
Paelopatides17486-
Paelopatides17487PROTEIN CBG26694
Paelopatides17488-
Paelopatides17489ENDONUCLEASE
Paelopatides174922-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides17493BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED
Paelopatides1749452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides17495-
Paelopatides17496-
Paelopatides17497PROTEIN CBG26694
Paelopatides17498EXPRESSED PROTEIN
Paelopatides17499-
Paelopatides17500-
Paelopatides17501REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17502-
Paelopatides17503PROTEIN CBG26694
Paelopatides17504-
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