About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19987PROTEIN CBG26694
Paelopatides19988PROTEIN CBG26694
Paelopatides19989CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides19990-
Paelopatides19991HYDROLASE OF PHP SUPERFAMILY-RELATED PROTEIN
Paelopatides19992-
Paelopatides19993PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19994HYPOTHETICAL HEAT DOMAIN-CONTAINING
Paelopatides19995HYPOTHETICAL HEAT DOMAIN-CONTAINING
Paelopatides19996TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides19997CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides19998IP01015P-RELATED
Paelopatides19999PR DOMAIN ZINC FINGER PROTEIN
Paelopatides20000ORGANIC SOLUTE TRANSPORTER-RELATED
Paelopatides20001ORGANIC SOLUTE TRANSPORTER-RELATED
Paelopatides20002REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20003REVERSE TRANSCRIPTASES
Paelopatides20004IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides20005RIBONUCLEASE
Paelopatides20006MYB/SANT-LIKE DNA-BINDING DOMAIN-CONTAINING PROTEIN 4
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