About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43149-
Paelopatides43150-
Paelopatides43151INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides43152-
Paelopatides43153SI:CH211-196P9.1-RELATED
Paelopatides43154SNF2/RAD54 HELICASE FAMILY
Paelopatides43155-
Paelopatides43156-
Paelopatides43157CHORDIN
Paelopatides43158VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN
Paelopatides43159GLUTATHIONE S-TRANSFERASE
Paelopatides43160ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
Paelopatides43161ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
Paelopatides43162ATP-DEPENDENT RNA AND DNA HELICASE
Paelopatides43163ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Paelopatides43164PROTEIN CBG26694
Paelopatides43165SOLUTE CARRIER FAMILY 35, MEMBER F5
Paelopatides43168-
Paelopatides4316952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides43170JANUS-A/JANUS-B
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