About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43191-
Paelopatides43192PROTEIN CBG26694
Paelopatides43193ENZYMATIC POLYPROTEIN-RELATED
Paelopatides43194-
Paelopatides43195FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides43196FI04643P-RELATED
Paelopatides4319715-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Paelopatides43199PROTEIN CBG26694
Paelopatides43200-
Paelopatides43201-
Paelopatides43202UNCHARACTERIZED
Paelopatides43203PROTEIN FLATTOP
Paelopatides43204EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
Paelopatides43205HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5
Paelopatides43206-
Paelopatides43207CASEIN KINASE-RELATED
Paelopatides43208UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN
Paelopatides43209PRE-MRNA SPLICING FACTOR
Paelopatides43210PRE-MRNA SPLICING FACTOR
Paelopatides43211NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
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