About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides43171-
Paelopatides43172G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Paelopatides43173REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43174ATP-DEPENDENT RNA HELICASE
Paelopatides43175MIXED LINEAGE PROTEIN KINASE
Paelopatides43176ATP-DEPENDENT RNA HELICASE DBP3
Paelopatides43177-
Paelopatides43178REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43179LITTLE ELONGATION COMPLEX SUBUNIT 2
Paelopatides43180CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides43181-
Paelopatides43182-
Paelopatides43183GAG-RELATED PROTEIN
Paelopatides43184ADP-RIBOSYL CYCLASE
Paelopatides43185WSCD FAMILY MEMBER CG9164
Paelopatides43186-
Paelopatides43187-
Paelopatides43188INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides43189-
Paelopatides43190PROTEIN CBG26694
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