About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g11348ZGC:195170
Clavulariidae_g11349SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g1135
Clavulariidae_g11350BEN DOMAIN-CONTAINING PROTEIN 6
Clavulariidae_g11351
Clavulariidae_g11352ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11353
Clavulariidae_g11354-
Clavulariidae_g11355
Clavulariidae_g11356C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11357
Clavulariidae_g11358
Clavulariidae_g11359
Clavulariidae_g1136
Clavulariidae_g11360
Clavulariidae_g11361-
Clavulariidae_g11362
Clavulariidae_g11363ENDONUCLEASE-RELATED
Clavulariidae_g11364DNA HELICASE-RELATED
Clavulariidae_g11365GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Clavulariidae_g11366
Clavulariidae_g11367SI:CH211-196P9.1-RELATED
Clavulariidae_g11368
Clavulariidae_g11369-
Clavulariidae_g1137
Clavulariidae_g11370THAP DOMAIN-CONTAINING PROTEIN 6
Clavulariidae_g11371C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11372C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11373SI:DKEY-29D5.2
Clavulariidae_g11374ATP-DEPENDENT DNA HELICASE
Clavulariidae_g11375RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Clavulariidae_g11376REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11377
Clavulariidae_g11378
Clavulariidae_g11379
Clavulariidae_g1138
Clavulariidae_g11380
Clavulariidae_g11381
Clavulariidae_g11382ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11383
Clavulariidae_g11384REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11385EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11386THAP DOMAIN PROTEIN
Clavulariidae_g11387
Clavulariidae_g11388PROTEIN CBG23764
Clavulariidae_g11389PROTEIN CBG26694
Clavulariidae_g1139
Clavulariidae_g11390RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Clavulariidae_g11391
Clavulariidae_g11392
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